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rs10508874
- Affected Gene(s) & Nearby Gene(s)
Nearby Gene(s)
Gene Symbol
Min P-value
Distance to TSS
LINC00841
3.950e-42
64358
LINC00840
1.280e-4
-10116
LINC00619
no xQTL evidence
-54927
QTL-associated Gene(s)
LINC00841
Min P-val: 3.950e-42
5
LINC02659
Min P-val: 2.730e-14
3
AL356157.1
Min P-val: 4.000e-13
1
LINC00840
Min P-val: 1.280e-4
2
RASGEF1A
Min P-val: 1.990e-4
1
ZNF485
Min P-val: 5.690e-4
4
CXCL12
Min P-val: 0.0011
10
ZNF32
Min P-val: 0.0043
6
FXYD4
Min P-val: 0.0049
1
ZNF239
Min P-val: 0.0054
4
CSGALNACT2
Min P-val: 0.0057
1
AC010864.1
Min P-val: 0.0110
1
ZNF487
Min P-val: 0.0216
2
HNRNPF
Min P-val: 0.0346
3
ZNF32-AS3
Min P-val: 0.0348
3
RET
Min P-val: 0.0525
1
ZNF32-AS2
Min P-val: 0.0536
2
LINC02658
Min P-val: 0.0552
1
HNRNPA3P1
Min P-val: 0.0895
1
LINC00841 - associated QTL(s) and summary information.
Total:
entries
, showing
to
Loop-associated Gene(s)
5KB Hi-C interactions of Specific Tissue/Cell Type:
H1-hESC: Embryonic Stem Cells
H1 Mesendoderm Cell
H1 Trophectoderm Cell
H1 Mesenchymal Stem Cell
H1 Neuronal Progenitor Cell
H9 Derived Neuro Ectodermal Cell
IMR-90: Human Foetal Lung Cell
HMEC: Human Mammary Epithelial Cell
GM12878: Human Lymphoblastoid Cell
Psoas
HFF-hTERT: Foreskin Fibroblast Cell Skin01
HFFc6: Foreskin Fibroblast Cell Skin02
Aorta
Liver
Astrocyte From Cerebellum
Hippocampus
Dorsolateral Prefrontal Cortex
DLD1: Colorectal Adenocarcinoma Epithelial Cell
Adrenal Gland
Left Ventricle
Small Intestine
HEK293: Embryonic Kidney
Panc1: Pancreas Epithelioid Carcinoma
HeLa-S3: Cervix Adenocarcinoma
Thymus
Lung
Ovary
Right Ventricle
Spleen
A549: Lung Carcinoma Epithelial Cells
K562: Human Erythroleukemia Cell
HepG2: Hepatocellular Carcinoma
HUVEC: Human Umbilical Vein Endothelial Cell
RPMI-7951: Skin Malignant Melanoma
NHEK: Primary Normal Human Epidermal Keratinocytes
Epigenomes of Specific Tissue/Cell Type:
ES-I3 Cell Line: CellLine (E001)
ES-WA7 Cell Line: CellLine (E002)
H1 Cell Line: CellLine (E003)
H1 BMP4 Derived Mesendoderm Cultured Cells: CellLineDerived (E004)
H1 BMP4 Derived Trophoblast Cultured Cells: CellLineDerived (E005)
H1 Derived Mesenchymal Stem Cells: CellLineDerived (E006)
H1 Derived Neuronal Progenitor Cultured Cells: CellLineDerived (E007)
H9 Cell Line: CellLine (E008)
H9 Derived Neuronal Progenitor Cultured Cells: CellLineDerived (E009)
H9 Derived Neuron Cultured Cells: CellLineDerived (E010)
hESC Derived CD184+ Endoderm Cultured Cells: CellLineDerived (E011)
hESC Derived CD56+ Ectoderm Cultured Cells: CellLineDerived (E012)
hESC Derived CD56+ Mesoderm Cultured Cells: CellLineDerived (E013)
HUES48 Cell Line: CellLine (E014)
HUES6 Cell Line: CellLine (E015)
HUES64 Cell Line: CellLine (E016)
IMR90 fetal lung fibroblasts Cell Line: CellLine (E017)
iPS-15b Cell Line: CellLine (E018)
iPS-18 Cell Line: CellLine (E019)
iPS-20b Cell Line: CellLine (E020)
iPS DF 6.9 Cell Line: CellLine (E021)
iPS DF 19.11 Cell Line: CellLine (E022)
Mesenchymal Stem Cell Derived Adipocyte Cultured Cells: CellLineDerived (E023)
ES-UCSF4 Cell Line: CellLine (E024)
Adipose Derived Mesenchymal Stem Cell Cultured Cells: PrimaryCell (E025)
Bone Marrow Derived Cultured Mesenchymal Stem Cells: PrimaryCell (E026)
Breast Myoepithelial Primary Cells: PrimaryCell (E027)
Breast variant Human Mammary Epithelial Cells (vHMEC): PrimaryCell (E028)
Primary monocytes from peripheral blood: PrimaryCell (E029)
Primary neutrophils from peripheral blood: PrimaryCell (E030)
Primary B cells from cord blood: PrimaryCell (E031)
Primary B cells from peripheral blood: PrimaryCell (E032)
Primary T cells from cord blood: PrimaryCell (E033)
Primary T cells from peripheral blood: PrimaryCell (E034)
Primary hematopoietic stem cells: PrimaryCell (E035)
Primary hematopoietic stem cells short term culture: PrimaryCell (E036)
Primary T helper memory cells from peripheral blood 2: PrimaryCell (E037)
Primary T helper naive cells from peripheral blood: PrimaryCell (E038)
Primary T helper naive cells from peripheral blood: PrimaryCell (E039)
Primary T helper memory cells from peripheral blood 1: PrimaryCell (E040)
Primary T helper cells PMA-I stimulated: PrimaryCell (E041)
Primary T helper 17 cells PMA-I stimulated: PrimaryCell (E042)
Primary T helper cells from peripheral blood: PrimaryCell (E043)
Primary T regulatory cells from peripheral blood: PrimaryCell (E044)
Primary T cells effector/memory enriched from peripheral blood: PrimaryCell (E045)
Primary Natural Killer cells from peripheral blood: PrimaryCell (E046)
Primary T killer naive cells from peripheral blood: PrimaryCell (E047)
Primary T killer memory cells from peripheral blood: PrimaryCell (E048)
Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells: PrimaryCell (E049)
Primary hematopoietic stem cells G-CSF-mobilized Female: PrimaryCell (E050)
Primary hematopoietic stem cells G-CSF-mobilized Male: PrimaryCell (E051)
Muscle Satellite Cultured Cells: PrimaryCell (E052)
Cortex derived primary cultured neurospheres: PrimaryCell (E053)
Ganglion Eminence derived primary cultured neurospheres: PrimaryCell (E054)
Foreskin Fibroblast Primary Cells skin01: PrimaryCell (E055)
Foreskin Fibroblast Primary Cells skin02: PrimaryCell (E056)
Foreskin Keratinocyte Primary Cells skin02: PrimaryCell (E057)
Foreskin Keratinocyte Primary Cells skin03: PrimaryCell (E058)
Foreskin Melanocyte Primary Cells skin01: PrimaryCell (E059)
Foreskin Melanocyte Primary Cells skin03: PrimaryCell (E061)
Primary mononuclear cells from peripheral blood: PrimaryCell (E062)
Adipose Nuclei: PrimaryTissue (E063)
Aorta: PrimaryTissue (E065)
Liver: PrimaryTissue (E066)
Brain Angular Gyrus: PrimaryTissue (E067)
Brain Anterior Caudate: PrimaryTissue (E068)
Brain Cingulate Gyrus: PrimaryTissue (E069)
Brain Germinal Matrix: PrimaryTissue (E070)
Brain Hippocampus Middle: PrimaryTissue (E071)
Brain Inferior Temporal Lobe: PrimaryTissue (E072)
Brain Dorsolateral Prefrontal Cortex: PrimaryTissue (E073)
Brain Substantia Nigra: PrimaryTissue (E074)
Colonic Mucosa: PrimaryTissue (E075)
Colon Smooth Muscle: PrimaryTissue (E076)
Duodenum Mucosa: PrimaryTissue (E077)
Duodenum Smooth Muscle: PrimaryTissue (E078)
Esophagus: PrimaryTissue (E079)
Fetal Adrenal Gland: PrimaryTissue (E080)
Fetal Brain Male: PrimaryTissue (E081)
Fetal Brain Female: PrimaryTissue (E082)
Fetal Heart: PrimaryTissue (E083)
Fetal Intestine Large: PrimaryTissue (E084)
Fetal Intestine Small: PrimaryTissue (E085)
Fetal Kidney: PrimaryTissue (E086)
Pancreatic Islets: PrimaryTissue (E087)
Fetal Lung: PrimaryTissue (E088)
Fetal Muscle Trunk: PrimaryTissue (E089)
Fetal Muscle Leg: PrimaryTissue (E090)
Placenta: PrimaryTissue (E091)
Fetal Stomach: PrimaryTissue (E092)
Fetal Thymus: PrimaryTissue (E093)
Gastric: PrimaryTissue (E094)
Left Ventricle: PrimaryTissue (E095)
Lung: PrimaryTissue (E096)
Ovary: PrimaryTissue (E097)
Pancreas: PrimaryTissue (E098)
Placenta Amnion: PrimaryTissue (E099)
Psoas Muscle: PrimaryTissue (E100)
Rectal Mucosa Donor 29: PrimaryTissue (E101)
Rectal Mucosa Donor 31: PrimaryTissue (E102)
Rectal Smooth Muscle: PrimaryTissue (E103)
Right Atrium: PrimaryTissue (E104)
Right Ventricle: PrimaryTissue (E105)
Sigmoid Colon: PrimaryTissue (E106)
Skeletal Muscle Male: PrimaryTissue (E107)
Skeletal Muscle Female: PrimaryTissue (E108)
Small Intestine: PrimaryTissue (E109)
Stomach Mucosa: PrimaryTissue (E110)
Stomach Smooth Muscle: PrimaryTissue (E111)
Thymus: PrimaryTissue (E112)
Spleen: PrimaryTissue (E113)
A549 EtOH 0.02pct Lung Carcinoma Cell Line: CellLine_Cancer (E114)
Dnd41 TCell Leukemia Cell Line: CellLine_Cancer (E115)
GM12878 Lymphoblastoid Cell Line: CellLine (E116)
HeLa-S3 Cervical Carcinoma Cell Line: CellLine_Cancer (E117)
HepG2 Hepatocellular Carcinoma Cell Line: CellLine_Cancer (E118)
HMEC Mammary Epithelial Primary Cells: CellLine (E119)
HSMM Skeletal Muscle Myoblasts Cell Line: CellLine (E120)
HSMM cell derived Skeletal Muscle Myotubes Cell Line: CellLine (E121)
HUVEC Umbilical Vein Endothelial Cells Cell Line: CellLine (E122)
K562 Leukemia Cell Line: CellLine (E123)
Monocytes-CD14+ RO01746 Cell Line: CellLine (E124)
NH-A Astrocytes Cell Line: CellLine (E125)
NHDF-Ad Adult Dermal Fibroblast Primary Cells: CellLine (E126)
NHEK-Epidermal Keratinocyte Primary Cells: CellLine (E127)
NHLF Lung Fibroblast Primary Cells: CellLine (E128)
Osteoblast Primary Cells: CellLine (E129)
Loop