org.mulinlab.varnote.operations.stack

Class IntervalStack

java.lang.Object

org.mulinlab.varnote.operations.stack.AbstractReaderStack

org.mulinlab.varnote.operations.stack.IntervalStack

Direct Known Subclasses:

IntervalStackFC

public class IntervalStack
extends AbstractReaderStack

Field Summary

Fields

Modifier and Type	Field and Description
protected java.util.List<LocFeature>	st
protected LocFeature	tempNode

Fields inherited from class org.mulinlab.varnote.operations.stack.AbstractReaderStack

iseof, it, resultProcessor

Constructor Summary

Constructors

Constructor and Description
IntervalStack(ProcessResult resultProcessor)

Method Summary

Modifier and Type	Method and Description
void	clearST()
void	findOverlap(LocFeature query)
boolean	findOverlapInST(LocFeature query)
void	findOverlaps(java.util.List<LocFeature> list)

Methods inherited from class org.mulinlab.varnote.operations.stack.AbstractReaderStack

getIt, getResultProcessor, setIseof, setIterator, setResultProcessor

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

st

protected java.util.List<LocFeature> st

tempNode

protected LocFeature tempNode

Constructor Detail

IntervalStack

public IntervalStack(ProcessResult resultProcessor)

Method Detail

clearST

public void clearST()

Overrides:

clearST in class AbstractReaderStack

findOverlaps

public void findOverlaps(java.util.List<LocFeature> list)

Specified by:

findOverlaps in class AbstractReaderStack

findOverlapInST

public boolean findOverlapInST(LocFeature query)

Specified by:

findOverlapInST in class AbstractReaderStack

findOverlap

public void findOverlap(LocFeature query)

Specified by:

findOverlap in class AbstractReaderStack